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Bioinformatician - Cloud Engineering, Genomics (m/f/d)


BioNTech SE


Location

Aschaffenburg | Germany


Job description

Become a member of the BioNTech Family!

As a part of our team of more than 5.000 pioneers, you will play a key role in developing solutions for some of the most crucial scientific challenges of our age. Within less than a year, we were able to develop our COVID-19 mRNA vaccine following the highest scientific and ethical standards - writing medical history.

We aim to reduce the suffering of people with life-changing therapies by harnessing the potential of the immune system to develop novel therapies against cancer and infectious diseases. While doing so, we are guided by our three company values: united, innovative, passionate. Get in touch with us if you are looking to be a part of creating hope for a healthy future in many people's lives.

Cloud & Database Engineer* Personalized Computational Genomics

We are seeking a highly motivated and skilled individual to join our Personalized Computational Genomics team as an HPC and Cloud Infrastructure Engineer. If you are passionate about implementation of personalized medicine and want to contribute to the development of innovative personalized cancer therapies and vaccines, we invite you to apply for this exciting position.

Aufgaben:
  • Lead the implementation and configuration of scalable AWS infrastructure, including compute and storage configurations
  • Collaborate with interdisciplinary teams to establish seamless interfaces for data acquisition from sequencing facilities, public data sources, and clinical samples
  • Migrate existing pipelines, ensuring version control, and addressing potential challenges such as data volume and environment dependencies
  • Develop and maintain both production and development environments, integrating and working with critical tools like Nextflow, Conda, and Matlab
  • Automate processes, containerize applications, and expand interfaces to foster a dynamic and efficient computational ecosystem supporting research teams
Qualifikationsprofil:
  • Bachelor's or Master's degree in Computer Science, Bioinformatics, or related field
  • Minimum of 3 years of experience in HPC and cloud infrastructure management
  • Strong knowledge of Amazon Web Services (AWS) experience, including AWS Parallel Server, VPC networking, S3, EC2, RDS, EFS
  • Strong knowledge of AWS Cloud resources management and optimization
  • Strong knowledge of Terraform and containerization technologies (Docker/Singularity)
  • Experience with SLURM and workflow management systems (Nextflow)
  • Proficient in scripting languages (Python, SQL)
  • Experience with version control systems (Github)
  • Excellent communication and collaboration skills
  • Excellent problem-solving and analytical skills
Benefits:
  • Flexible Working Time
  • Mobile Office
  • Work from EU Countries
  • Company Pension Scheme
  • Childcare
  • Jobticket
  • Company Bike
  • Leave Account
  • Fitness Courses
... and much more.


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